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Review: Locality sensitive hashing for the edit distance

I'm reviewing some of the findings from the preprint:

Locality sensitive hashing for the edit distance Guillaume Marcais, Dan DeBlasio, Prashant Pandey, Carl Kingsford bioRxiv 534446; doi: https://doi.org/10.1101/534446

Problem

Determine if two sequences overlap.

Existing solutions

Locality …

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Luis F. Mieses Gómez

Biography:

My name is Luis F. Mieses Gómez, I’m a Computer Science student at the University of Puerto Rico, Río Piedras Campus. I'm currently doing research with Dr. Humberto Ortiz-Zuazaga.

My career short-term goals are to finish my degree in Computer Science, in May 2020. Furthermore, my long-term goals …

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Journal club: schedule for Spring 2019

Spring 2019

We're meeting Fridays at 9:00 AM in the lab. Here's the schedule of journal club presentations for this semester.

Date Person Paper
Feb 8 Angel Sanquiche Axolotl
Feb 15 cancelled
Feb 22 Louis Gil / Roberto Lopez Oshlack / Streams
Mar 1 Israel Dilan Next-gen Sequence Assembly
Mar 8 …
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Briknie Báez Rodríguez

Contact Info

  • e-mail: briknie.baez@upr.edu
  • GitHub: https://github.com/sbriknie

Bio:

  • French Horn player 📯
  • Computer Science Student
  • Trying to learn new things every day
  • Someday I'll like to help people with the things I do

Research Goals

By being part of the MegaProbe Lab I aim to improve …

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Heriberto Camacho Torres

Bio:

  • Likes to nap.
  • Update: naps are a rare commodity now, due to lack of free time.

  • Gamer, from tabletop games to videogames.

  • Update: unchanged.

  • Learning the ways of Cybersecurity, taking naps in between.

  • Update: Got a minor in Cybersecurity from the University of Puerto Rico, Rio Piedras Campus

  • Coffee …

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Roberto C. López-Rivera

Roberto C. López-Rivera, BS

Short Biography

My name is Roberto C. López Rivera, I was born and raised in San Juan Puerto Rico. I'm a computer science undergraduate student, I began doing research with Humberto in January 25, 2019. This summer of 2019 I went to an internship in Pittsburgh …

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Walter Báez Laguna

Biography :memo:

My name is Walter Báez Laguna and I'm currently an undergraduate student at the University of Puerto Rico, Río Piedras Campus. I major in Computer Sciences and I'm also a former cheerleader for the UPRRP Cheerleading Team. My goal for this semester is to finsih my classes so …

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Juan Alejandro Lugo-Torres

Wandering through the abandoned lab, you arrive at a small room. Upon further inspection you notice a great many machinations lying about, surrendered to time. Suddenly you jolt, startled by the whirring of machines, the turning of gears, and the flaring of lights. Roll initiative...

Bio:

  • Hi, I'm Juan Lugo-Torres …
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